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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs941333 chr2:132187962 T/C CCDC74B chr2:130896860-130902707:- 0.37 6.68 6.73E-11 Box Plot
THCA rs941334 chr2:132187885 A/G CCDC74B chr2:130896860-130902707:- -0.38 -6.87 1.97E-11 Box Plot
THCA rs941336 chr2:132187345 C/T CCDC74B chr2:130896860-130902707:- 0.38 6.93 1.4E-11 Box Plot
THCA rs9413980 chr9:69124199 A/T FAM95B1 chr9:42466317-42474239:+ 0.36 6.42 3.23E-10 Box Plot
THCA rs9414025 chr9:69081222 G/A FAM95B1 chr9:42466317-42474239:+ 0.36 6.43 3.09E-10 Box Plot
THCA rs941451 chr17:18173980 A/G LOC162632 chr17:16614993-16707819:+ 0.36 5.94 5.41E-9 Box Plot
THCA rs9420434 chr10:88843209 C/T FAM35B chr10:46897641-46939143:+ -0.36 -6.72 5.04E-11 Box Plot
THCA rs9420437 chr10:88869245 A/G FAM35B chr10:46897641-46939143:+ -0.37 -7.2 2.29E-12 Box Plot
THCA rs9420438 chr10:88873814 C/A FAM35B chr10:46897641-46939143:+ -0.66 -10.91 6.95E-25 Box Plot
THCA rs9420439 chr10:88875403 C/T FAM35B chr10:46897641-46939143:+ -0.66 -10.9 7.17E-25 Box Plot
THCA rs9420446 chr10:88880689 C/T FAM35B chr10:46897641-46939143:+ -0.67 -11.1 1.26E-25 Box Plot
THCA rs9420447 chr10:88881733 G/A FAM35B chr10:46897641-46939143:+ -0.37 -7.12 3.87E-12 Box Plot
THCA rs9420450 chr10:88887818 C/T FAM35B chr10:46897641-46939143:+ -0.37 -7.22 2.05E-12 Box Plot
THCA rs9421572 chr10:88820789 T/C FAM35B chr10:46897641-46939143:+ -0.57 -7.87 2.38E-14 Box Plot
THCA rs9421574 chr10:88823342 C/T FAM35B chr10:46897641-46939143:+ -0.57 -7.87 2.38E-14 Box Plot